GIMIAS Extensions

Find extensions for GIMIAS: plugins, command line plugins and workflows. To check if an extension is publicly available (free) or not, you will find the license field in the description page of the extensions you are interested: BSD or Private. If the license is private, it means that is not publicly available and you need to contact to the owner of the extension and get an agreement on how to share it.

Input/Output (8/- )

Visualization (18/- )

Processing (27/- )

Biomedical domains (17/7 )

DICOM

6 Reviews: 2

GIMIAS DICOM Plug-in allows to load and view DICOM data in G...

Cardiac Segmentation

0 Reviews: 0

This plug-in provides algorithms specifically developed for cardiac segmentation. The algorithms allow to perform se...

Mesh Editor

0 Reviews: 0

The Mesh Editor plug-in provides tools for mesh editing, including refinement, cutting, hole filling, volumetric mesh generation, etc. This plug...

Manual Segmentation

8 Reviews: 0

Manual segmentation allows you to manually draw one or more regions of interest (ROIs) over an image, compute statistics of image intensity valu...

Virtual Angiography

0 Reviews: 0

GIMIAS Virtual Angiography plug-in contains visualization features specific for aneurysm management and virtual t...

Cardiac Simulation

0 Reviews: 0

This plug-in allows to simulate the placement of the pacemaker leads on the heart model and compare the electrophysiological activation of the h...

Angio Segmentation

0 Reviews: 0

The Angio Segmentation Plug-in provides several image segmentation tools specific for angiography applications:

  • ...

Philips Segmentation

8 Reviews: 0

The aim of this plug-in is to segment SSFP data and LE, it uses a specific Dicom Reader from Philips. It can save meshes in bitmask format. It's co...

Web Services

0 Reviews: 0

Provides a Web Services server that exposes GIMIAS functionalities using Web Services interface.This type of interface is accessed through an HTTP...

Virtual Stenting

10 Reviews: 0

This plugin allows the user to simulate the deployment of a stent within the vessel geometry.

The user can select the vessel centerline, t...

XNAT Plugin

9 Reviews: 0

This plugin allows to connect to a remote XNAT database. XNAT is an open source imaging informatics platform, developed by the Neuroinformatics R...

Signal Viewer

8 Reviews: 0

This plug-in provides a multidimensional signal viewer and exploration module. It allows to view signals with multipl...

Cardiac Quantification

0 Reviews: 0

The Cardiac Quantification Plugin provides tool for the quantification of myocardial function using volume, motion and deformation indexes.

...

Angio Morphology

0 Reviews: 0

The Angio Morphology plugin provides tools for the morphological analysis of intra-cranial aneurysm.

The available tools allow to manually select...

Image Tools

0 Reviews: 0

This plugin provides several image processing tools:

  • Cropping tool
  • Change orientation
  • Join images
  • Overlay image...

FocusDET

8 Reviews: 0

This plugin allows the user to locate the epileptogenic focus using Ictal and Inter-ictal SPECT images and MRI, employing SISCOM methodology.

Cut Opennings and Export Surfaces

0 Reviews: 0

This is a plugin to allow the user to select which region from the segmented image that is of interest for CFD modelling. The plugin tries to take...

Perfusion quantification measured using MRI in Oncology

10 Reviews: 0

The goal of the project is the quantification of changes in healthy brain tissue and in the tumor area using MRI and perfusion in patients with Gli...

Taverna

0 Reviews: 0

Released the version 0.2.2 of the Taverna plugin for GIMIAS that...

QuantiDOPA

0 Reviews: 0

This plug-in allows the user to perform a semiautomatic quantification of the striatal uptake in neurotransmissio...

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